Factor # Logo Ambiguity Code
CREB #0 rTGACgyr
CREB #1 ttrtGYAA
CREB #10 TtACGTaA
CREB #11 tTGCAa
CREB #2 caCGTGGc
CREB #3 mCACGTGk
CREB #4 aTGACGTCAt
CREB #5 aTGAsTCAt
CREB #6 aTTg..cAAt
CREB #7 gcCACGTGgc
CREB #8 GtG.CaC
CREB #9 gTGacGTG
E2F4 #0 GCGssaaa
HNF3beta #0 arTAAACA
HNF3beta #1 kTTGTT
HNF3beta #2 TGTTTrTT
HNF4alpha #0 ..RGGTCA
HNF4alpha #1 rGwaCA...tGTwC
HNF4alpha #2 aGaACA...TGTtCt
HNF4alpha #3 AGGTCAc.gTGACCT
HNF4alpha #4 AGGTCATGACCT
HNF4alpha #5 tcAAGkTCAag
HNF4alpha #6 TGACCT...kTGACCT
HNF4alpha #7 TGACCTTTGACCyy
HNF6 #0 ATCGAT.s
HNF6 #1 CAcm.Ata..TaTkG
HNF6 #2 CgATcG
HNF6 #3 cgATCGAT
NANOG #0 TAATTrsy
NANOG #1 AAgyrcTT
NANOG #2 AaT.AtT
NANOG #3 TAATt.aATTA
NANOG #4 TAATTAat
NEUROD1 #0 cCACGTGg
NEUROD1 #1 CgCaCGC
NEUROD1 #2 rCAgcTGy
NEUROD1 #3 tCACGTGa
OCT4 #0 ATGCAAAT
OCT4 #1 TAAwTTA
RelB #0 GGrAw.yCCc
RelB #1 GGaawttCC
RelB #2 GGawwtCC
RelB #3 GGGGAwTCCCC
SOX2 #0 AACAAWRr
c-Rel #0 gGGr.tTyC
c-Rel #1 krGAAAa.y
c-Rel #2 GGaawttCC
c-Rel #3 GGawwtCC
c-Rel #4 GGGgAwTcCCC
p50 #0 GraAw.cCCm
p52 #0 GGrAw.yCCc
p52 #1 GGaawttCC
p52 #2 GGawwtCC
p52 #3 GGGgAwTcCCC
p65 #0 GGrAw.mCCc
p65 #1 GGGGAwTCCCC